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macroape

3.3.4

Macroape is an abbreviation for MAtrix CompaRisOn by Approximate P-value Estimation. It's a bioinformatic tool for evaluating similarity measure and best alignment between a pair of Position Weight Matrices(PWM), finding thresholds by P-values and inside out and even searching a collection of motifs for the most similar ones. Used approach and application described in manual at https://docs.google.com/document/pub?id=1_jsxhMNzMzy4d2d_byAd3n6Szg5gEcqG_Sf7w9tEqWw

installgem install macroape -v 3.3.4
Authors

Ilya Vorontsov

7,836 total downloads 638 for this version
Owners

Fe1c0797f345249625590d25a51efd0a

Gemfile
gem 'macroape', '~> 3.3.4'
Versions
  1. 4.0.2 September 30, 2013 (35 KB)
  2. 4.0.1 May 1, 2013 (34 KB)
  3. 4.0.0 April 29, 2013 (34 KB)
  4. 3.3.8 December 7, 2012 (33.5 KB)
  5. 3.3.7 September 15, 2012 (28.5 KB)
Show all versions (14 total)
Runtime Dependencies
  1. bioinform >= 0.1.5