RubyGems.org

all gems

starting with B

Displaying gems 1681 - 1710 of 3949 in total

  1. 319 downloads
    bio-exominer (0.0.3) Parse publications for gene names in a fuzzy fashion
  2. 1,415 downloads
    bio-exportpred (0.0.1) Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins. Requires ...
  3. 793 downloads
    bio-express_beta_diversity (0.1.0) Interface for express beta diversity file formats
  4. 8,825 downloads
    bio-faster (0.4.5) A fast parser for FastQ files
  5. 1,470 downloads
    bio-foo (0.0.0) longer description of your gem
  6. 17,250 downloads
    bio-gadget (0.4.8) Gadgets for bioinformatics
  7. 2,211 downloads
    bio-gag (0.1.0) bio-gag is a biogem for detecting and correcting a particular type of error that occurs/occurred ...
  8. 30,629 downloads
    bio-gem (1.3.6) Biogem is a software generator for those bioinformaticans who want to start coding an application...
  9. 5,660 downloads
    bio-genomic-interval (0.1.2) a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state between tw...
  10. 15,397 downloads
    bio-gff3 (0.9.1) GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low memory use a...
  11. 3,286 downloads
    bio-gff3-pltools (0.3.0) Ruby wrapper for the gff3-pltools.
  12. 1,236 downloads
    bio-gggenome (0.2.0) A Ruby client for GGGenome the Ultrafast sequence search
  13. 3,201 downloads
    bio-gngm (0.2.1) Identify causative mutations in a model genome from NGS reads using the NGM method.
  14. 5,889 downloads
    bio-graphics (1.4) Library for visualizing genomic regions
  15. 11,679 downloads
    bio-grid (0.3.3) A BioGem to submit jobs on a queue system
  16. 1,795 downloads
    bio-hello (0.0.0) Encode any message string into a DNA sequence
  17. 1,271 downloads
    bio-hmmer3_report (0.0.1) Enables parsing of HMMER version 3 reports
  18. 2,366 downloads
    bio-hmmer_model (0.0.2) Parse PFAM HMM definition files so that the models can be accessible programmatically
  19. 1,382 downloads
    bio-hydropathy (0.0.1) Hydropathy scale for BioRuby
  20. 934 downloads
    bio-img_metadata (0.0.1) Reads metadata from Integrated Microbial Genomes (IMG) metadata files into a programmaticly usefu...
  21. 1,183 downloads
    bio-incanter (0.1.0) A Jruby wrapper to Incanter lib
  22. 969 downloads
    bioinfo (0.0.5) This gem has been yanked. Please contact me to get the namespace for greater use.
  23. 15,155 downloads
    bioinform (0.2.1) A bunch of useful classes for bioinformatics
  24. 6,110 downloads
    biointerchange (1.0.1) BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous data forma...
  25. 1,182 downloads
    bio-ipcress (0.0.1) a programmatic interface to the iPCRess in-silico PCR software. iPCRess is part of the exonerate ...
  26. 6,090 downloads
    bio-isoelectric_point (0.1.3) A bioruby plugin for calculating the isoelectric point of a protein
  27. 3,479 downloads
    bio-kb-illumina (0.1.0) Provide access to the IlluminaHumanAnnotations. Database comes form Bioconductor's package l...
  28. 5,695 downloads
    bio-kmer_counter (0.1.2) A biogem for counting small kmers for fingerprinting nucleotide sequences. See README for details.
  29. 2,288 downloads
    bio-krona (0.1.1) This biogem is built around Krona, a flashy way of representing hierarchical data.
  30. 146 downloads
    bio-kseq (0.0.2) A fast FASTA/FASTQ parser based on kseq.h by Heng Li