RubyGems.org

all gems

starting with B

Displaying gems 1711 - 1740 of 4094 in total

  1. 4,696 downloads
    bio-bgzf (0.2.1) This library provides support for BGZF (Blocked GZip Format) in Ruby. BGZF, originally defined as...
  2. 7,420 downloads
    bio-bigbio (0.1.6) Fasta reader, ORF emitter, sequence translation
  3. 1,564 downloads
    bio-biolinux (0.1.0) Meta package for BioLinux distribution: bio-core, bio-core-ext
  4. 997 downloads
    bio-biostars-analytics (0.2.0) Ruby script for data-mining biostars.org using web-crawling techniques as well as utilizing the B...
  5. 10,455 downloads
    bio-blastxmlparser (2.0.1) Fast big data BLAST XML parser and library; this libxml2 based version is 50x faster than BioRuby...
  6. 136 downloads
    bio-blat-tools (0.1.0) Tools to manipulate blat files from the command line. Uses the Bio::Blat object from BioRuby, but...
  7. 4,705 downloads
    bio-bwa (0.2.2) Ruby binding for BWA mapping software, built using Ruby-FFI library
  8. 4,057 downloads
    bio-cd-hit-report (0.1.0) A Ruby library for reading CD-HIT cluster reports
  9. 3,418 downloads
    bio-chembl (0.1.3) BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
  10. 781 downloads
    bio-cigar (0.1.0) A parser for CIGAR format alignments.
  11. 2,887 downloads
    bio-cnls_screenscraper (0.3.0) Programmatic interface to the cNLS nuclear localisation signal prediction software
  12. 971 downloads
    bio-commandeer (0.1.0) A dead simple method of running shell commands from within Ruby, by applying opinion
  13. 3,062 downloads
    bio-core (0.0.1) Bioruby core plugins
  14. 1,606 downloads
    bio-core-ext (0.0.1) BioRuby plugins with dependecies from external library or tools
  15. 1,573 downloads
    bio-data-restriction_enzyme (1.109.0) Restriction Enzyme Dataset from REBASE in yaml form
  16. 3,307 downloads
    biodb (2.1.0) Short for BioTCM::Databases
  17. 7,850 downloads
    bio-dbla-classifier (0.7.1) Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
  18. 1,518 downloads
    bio-dbsnp (0.1.1) decoding the dbSNP bitfield containg detaild information
  19. 39,660 downloads
    biodiversity (3.1.5) Tools for biodiversity informatics
  20. 60,197 downloads
    biodiversity19 (3.1.5) Tools for biodiversity informatics
  21. 1,612 downloads
    bio-emboss_six_frame_nucleotide_sequences (0.1.0) a method to get the nucleotide sequence of translations done by the EMBOSS bioinformatics package...
  22. 1,555 downloads
    bio-ensembl (1.1.0) This API provides a complete set of methods and classes to access the Ensembl database using Ruby...
  23. 1,285 downloads
    bio-ensembl-rest (0.2.0) A Ruby library for the RESTful Ensembl API.
  24. 392 downloads
    bio-exominer (0.0.3) Parse publications for gene names in a fuzzy fashion
  25. 1,482 downloads
    bio-exportpred (0.0.1) Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins. Requires ...
  26. 942 downloads
    bio-express_beta_diversity (0.1.0) Interface for express beta diversity file formats
  27. 130 downloads
    bio-faidx (0.0.1) ools to work with fasta files, indexed with samtools. The initial releases depend on bio-samtools...
  28. 9,315 downloads
    bio-faster (0.4.5) A fast parser for FastQ files
  29. 1,536 downloads
    bio-foo (0.0.0) longer description of your gem
  30. 18,678 downloads
    bio-gadget (0.4.8) Gadgets for bioinformatics