RubyGems.org

all gems

starting with B

Displaying gems 1711 - 1740 of 4076 in total

  1. 4,046 downloads
    bio-cd-hit-report (0.1.0) A Ruby library for reading CD-HIT cluster reports
  2. 3,409 downloads
    bio-chembl (0.1.3) BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
  3. 772 downloads
    bio-cigar (0.1.0) A parser for CIGAR format alignments.
  4. 2,880 downloads
    bio-cnls_screenscraper (0.3.0) Programmatic interface to the cNLS nuclear localisation signal prediction software
  5. 961 downloads
    bio-commandeer (0.1.0) A dead simple method of running shell commands from within Ruby, by applying opinion
  6. 3,054 downloads
    bio-core (0.0.1) Bioruby core plugins
  7. 1,604 downloads
    bio-core-ext (0.0.1) BioRuby plugins with dependecies from external library or tools
  8. 1,570 downloads
    bio-data-restriction_enzyme (1.109.0) Restriction Enzyme Dataset from REBASE in yaml form
  9. 3,293 downloads
    biodb (2.1.0) Short for BioTCM::Databases
  10. 7,829 downloads
    bio-dbla-classifier (0.7.1) Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags
  11. 1,514 downloads
    bio-dbsnp (0.1.1) decoding the dbSNP bitfield containg detaild information
  12. 39,551 downloads
    biodiversity (3.1.5) Tools for biodiversity informatics
  13. 60,039 downloads
    biodiversity19 (3.1.5) Tools for biodiversity informatics
  14. 1,609 downloads
    bio-emboss_six_frame_nucleotide_sequences (0.1.0) a method to get the nucleotide sequence of translations done by the EMBOSS bioinformatics package...
  15. 1,553 downloads
    bio-ensembl (1.1.0) This API provides a complete set of methods and classes to access the Ensembl database using Ruby...
  16. 1,278 downloads
    bio-ensembl-rest (0.2.0) A Ruby library for the RESTful Ensembl API.
  17. 387 downloads
    bio-exominer (0.0.3) Parse publications for gene names in a fuzzy fashion
  18. 1,480 downloads
    bio-exportpred (0.0.1) Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins. Requires ...
  19. 931 downloads
    bio-express_beta_diversity (0.1.0) Interface for express beta diversity file formats
  20. 124 downloads
    bio-faidx (0.0.1) ools to work with fasta files, indexed with samtools. The initial releases depend on bio-samtools...
  21. 9,285 downloads
    bio-faster (0.4.5) A fast parser for FastQ files
  22. 1,533 downloads
    bio-foo (0.0.0) longer description of your gem
  23. 18,610 downloads
    bio-gadget (0.4.8) Gadgets for bioinformatics
  24. 2,338 downloads
    bio-gag (0.1.0) bio-gag is a biogem for detecting and correcting a particular type of error that occurs/occurred ...
  25. 32,045 downloads
    bio-gem (1.3.6) Biogem is a software generator for those bioinformaticans who want to start coding an application...
  26. 5,880 downloads
    bio-genomic-interval (0.1.2) a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state between tw...
  27. 16,028 downloads
    bio-gff3 (0.9.1) GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low memory use a...
  28. 3,476 downloads
    bio-gff3-pltools (0.3.0) Ruby wrapper for the gff3-pltools.
  29. 1,364 downloads
    bio-gggenome (0.2.0) A Ruby client for GGGenome the Ultrafast sequence search
  30. 3,394 downloads
    bio-gngm (0.2.1) Identify causative mutations in a model genome from NGS reads using the NGM method.