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Displaying gems 1741 - 1770 of 4186 in total

bio-band 0.1.11

Data mining and machine learning algorithms for JRuby

7,447 Downloads

bio-basespace-sdk 0.1.7

BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...

4,221 Downloads

bio-bgzf 0.2.1

This library provides support for BGZF (Blocked GZip Format) in Ruby. BGZF, originally ...

4,973 Downloads

bio-bigbio 0.1.6

Fasta reader, ORF emitter, sequence translation

7,799 Downloads

bio-biolinux 0.1.0

Meta package for BioLinux distribution: bio-core, bio-core-ext

1,632 Downloads

bio-biostars-analytics 0.2.0

Ruby script for data-mining biostars.org using web-crawling techniques as well as utili...

1,193 Downloads

bio-blastxmlparser 2.0.2

Fast big data BLAST XML parser and library; this libxml2 based version is 50x faster th...

11,846 Downloads

bio-blat-tools 0.1.0

Tools to manipulate blat files from the command line. Uses the Bio::Blat object from Bi...

213 Downloads

bio-bwa 0.2.2

Ruby binding for BWA mapping software, built using Ruby-FFI library

4,898 Downloads

bio-cd-hit-report 0.1.0

A Ruby library for reading CD-HIT cluster reports

4,302 Downloads

bio-chembl 0.1.3

BioRuby plugin for ChEMBL REST API Client, Parser and Container classes

3,610 Downloads

bio-cigar 0.1.0

A parser for CIGAR format alignments.

918 Downloads

bio-cnls_screenscraper 0.3.0

Programmatic interface to the cNLS nuclear localisation signal prediction software

3,010 Downloads

bio-commandeer 0.1.0

A dead simple method of running shell commands from within Ruby, by applying opinion

1,099 Downloads

bio-core 0.0.1

Bioruby core plugins

3,194 Downloads

bio-core-ext 0.0.1

BioRuby plugins with dependecies from external library or tools

1,668 Downloads

bio-data-restriction_enzyme 1.109.0

Restriction Enzyme Dataset from REBASE in yaml form

1,637 Downloads

biodb 2.1.0

Short for BioTCM::Databases

3,565 Downloads

bio-dbla-classifier 0.7.1

Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags

8,214 Downloads

bio-dbsnp 0.1.1

decoding the dbSNP bitfield containg detaild information

1,590 Downloads

biodiversity 3.1.5

Tools for biodiversity informatics

41,625 Downloads

biodiversity19 3.1.5

Tools for biodiversity informatics

63,214 Downloads

bio-emboss_six_frame_nucleotide_sequences 0.1.0

a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...

1,676 Downloads

bio-ensembl 1.1.0

This API provides a complete set of methods and classes to access the Ensembl database ...

1,615 Downloads

bio-ensembl-rest 0.2.0

A Ruby library for the RESTful Ensembl API.

1,408 Downloads

bio-exominer 0.0.3

Parse publications for gene names in a fuzzy fashion

465 Downloads

bio-exportpred 0.0.1

Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....

1,545 Downloads

bio-express_beta_diversity 0.1.0

Interface for express beta diversity file formats

1,079 Downloads

bio-faidx 0.0.1

ools to work with fasta files, indexed with samtools. The initial releases depend on bi...

211 Downloads

bio-faster 0.4.5

A fast parser for FastQ files

9,741 Downloads