RubyGems.org

all gems

starting with B

Displaying gems 1771 - 1800 of 4091 in total

  1. 20,320 downloads
    biomart (0.2.3) A ruby API for interacting with Biomart XML based webservices.
  2. 202 downloads
    biome (0.0.1) WIP
  3. 1,615 downloads
    biomodel_client (0.1.0) Client package for creating, sending, recieving and consuming SOAP messages from BioModels search...
  4. 6,564 downloads
    bio-nexml (1.1.0) This plugin reads, writes and generates NeXML
  5. 5,669 downloads
    bio-ngs (0.5.2) bio-ngs provides a framework for handling NGS data with BioRuby
  6. 5,405 downloads
    bio-octopus (0.1.1) Running and parsing of the protein transmembrane domain predictor octopus
  7. 1,500 downloads
    bio-phyloxml (0.9.0) Provides PhyloXML support for BioRuby.
  8. 8,015 downloads
    bio-phyta (0.9.4) Pipeline to remove contaminations from EST libraries
  9. 6,062 downloads
    biopieces (0.3.4) Biopieces is a bioinformatic framework of tools easily used and easily created.
  10. 4,310 downloads
    bio-pileup_iterator (0.0.4) Iterate through a samtools pileup file
  11. 3,584 downloads
    bio-plasmoap (0.0.2) The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptides in Plas...
  12. 1,102 downloads
    bio-polymarker_db_batch (0.4.0) Server for polymarker. To be used with cron
  13. 2,644 downloads
    bio-polyploid-tools (0.5.2) Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid wheat
  14. 4,275 downloads
    bioportal (2.2) Supports linking of Models within a RoR application to a Concept and Ontology within the BioPortal
  15. 99 downloads
    bio-primer3 (0.0.1.pre) Primer3-related Ruby code - wrappers, Boulder IO, etc.
  16. 2,444 downloads
    bio-protparam (0.2.0) Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPerl, except ...
  17. 1,870 downloads
    biopsy (0.2.0) framework for optimising any computational pipeline or program
  18. 5,878 downloads
    bio-publisci (0.1.0) A toolkit for publishing scientific results and datasets using RDF, OWL, and related technologies
  19. 366 downloads
    bio-qtlHD (0.0.1.alpha.1) Ruby tools and scripts for QTL mapping, part of the qtlHD project
  20. 728 downloads
    bio-raxml (0.1.0) Just a test
  21. 3,315 downloads
    bio-rdf (0.0.2) Store relationships in a triple-store, such as gene enrichment and QTL, and use this information ...
  22. 933 downloads
    bio-repeatmasker (0.0.3) A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath
  23. 1,862 downloads
    bio-restriction_enzyme (1.0.0) Digests DNA based on restriction enzyme cut patterns
  24. 15,202 downloads
    bioroebe (0.0.45) A simple collection of useful Bioruby-related code. It is similar in spirit to the BioRu...
  25. 1,184 downloads
    bioruby-bio (1.3.1.5000) BioRuby is a library for bioinformatics (biology + information science).
  26. 1,683 downloads
    bios (0.0.1) Coming soon!
  27. 6,241 downloads
    bio-sambamba (0.0.5) New Sambamba library comes with a command-line tool for working with SAM/BAM files. This gem brin...
  28. 27,107 downloads
    bio-samtools (2.2.0) Binder of samtools for ruby, on the top of FFI. This project was born from the need to add su...
  29. 636 downloads
    bio-samtools-server (0.1.2) A minimal web service on the top of sinatra to query bam files
  30. 450 downloads
    bioseqalign (0.0.2) A simple gem to perform fast pairwise sequence alignment using seqan