Displaying gems 1771 - 1800 of 4091 in total
A ruby API for interacting with Biomart XML based webservices.
Client package for creating, sending, recieving and consuming SOAP messages from BioModels search...
This plugin reads, writes and generates NeXML
bio-ngs provides a framework for handling NGS data with BioRuby
Running and parsing of the protein transmembrane domain predictor octopus
Provides PhyloXML support for BioRuby.
Pipeline to remove contaminations from EST libraries
Biopieces is a bioinformatic framework of tools easily used and easily created.
Iterate through a samtools pileup file
The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptides in Plas...
Server for polymarker. To be used with cron
Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid wheat
Supports linking of Models within a RoR application to a Concept and Ontology within the BioPortal
Primer3-related Ruby code - wrappers, Boulder IO, etc.
Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPerl, except ...
framework for optimising any computational pipeline or program
A toolkit for publishing scientific results and datasets using RDF, OWL, and related technologies
Ruby tools and scripts for QTL mapping, part of the qtlHD project
Just a test
Store relationships in a triple-store, such as gene enrichment and QTL, and use this information ...
A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath
Digests DNA based on restriction enzyme cut patterns
A simple collection of useful Bioruby-related code. It is
similar in spirit to the BioRu...
BioRuby is a library for bioinformatics (biology + information science).
New Sambamba library comes with a command-line tool for working with SAM/BAM files. This gem brin...
Binder of samtools for ruby, on the top of FFI.
This project was born from the need to add su...
A minimal web service on the top of sinatra to query bam files
A simple gem to perform fast pairwise sequence alignment using seqan