all gems

starting with B

Displaying gems 1771 - 1800 of 4034 in total

  1. 696 downloads
    bio-raxml (0.1.0) Just a test
  2. 3,255 downloads
    bio-rdf (0.0.2) Store relationships in a triple-store, such as gene enrichment and QTL, and use this information ...
  3. 874 downloads
    bio-repeatmasker (0.0.3) A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath
  4. 1,835 downloads
    bio-restriction_enzyme (1.0.0) Digests DNA based on restriction enzyme cut patterns
  5. 13,941 downloads
    bioroebe (0.0.44) A simple collection of useful Bioruby-related code. It is similar in spirit to the BioRu...
  6. 987 downloads
    bioruby-bio ( BioRuby is a library for bioinformatics (biology + information science).
  7. 1,655 downloads
    bios (0.0.1) Coming soon!
  8. 6,113 downloads
    bio-sambamba (0.0.5) New Sambamba library comes with a command-line tool for working with SAM/BAM files. This gem brin...
  9. 26,350 downloads
    bio-samtools (2.1.0) Binder of samtools for ruby, on the top of FFI. This project was born from the need to add su...
  10. 576 downloads
    bio-samtools-server (0.1.2) A minimal web service on the top of sinatra to query bam files
  11. 379 downloads
    bioseqalign (0.0.2) A simple gem to perform fast pairwise sequence alignment using seqan
  12. 1,862 downloads
    bio-sge (0.0.0) Entries in a flatfile will be parased by the BioRuby's module. These entries a...
  13. 6,673 downloads
    bio-signalp (0.3.1) A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, but seems ...
  14. 1,179 downloads
    bio-statsample-glm (0.1.1) Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This gem inclu...
  15. 2,447 downloads
    bio-statsample-timeseries (0.2.1) Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries functions...
  16. 763 downloads
    bio-stockholm (0.0.1) Parses stockholm sequence alignment format
  17. 12,403 downloads
    bio-svgenes (0.4.1) This bio-gem facilitates the creation of pretty, publication quality SVG images from feature data.
  18. 2,440 downloads
    bio-synreport (0.1.2) Takes a GFF and genomic sequence file, constructs CDS and when given a position and alternative b...
  19. 3,677 downloads
    bio-tabix (1.0.1) Tabix file indexing routines from the samtools package
  20. 8,286 downloads
    bio-table (1.0.0) Functions and tools for tranforming and changing tab delimited and comma separated table files - ...
  21. 1,344 downloads
    biotcm (0.0.7) Integrating several databases, data structure and algorithms, BioTCM is designed as a base gem to...
  22. 6,440 downloads
    bio-tm_hmm (0.2.2) A bioruby plugin for interaction with the transmembrane predictor TMHMM
  23. 19,975 downloads
    bio-ucsc-api (0.6.2) Ruby UCSC API: accessing the UCSC Genome Database using Ruby
  24. 3,334 downloads
    bio-ucsc-util (0.1.2) Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWigSummary a...
  25. 2,558 downloads
    bio-unichem (0.3.0) BioRuby plugin for UniChem REST Web service
  26. 1,556 downloads
    bio-vcf (0.8.0) Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting
  27. 1,874 downloads
    bio-velvet (0.4.2) Parser to work with some file formats used in the velvet DNA assembler
  28. 629 downloads
    bio-velvet_underground (0.1.0) Bindings to some internals of the velvet assembler.
  29. 2,781 downloads
    bio-wolf_psort_wrapper (0.0.3) Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is available at ht...
  30. 255 downloads
    bip70 (0.0.1) Create bitcoin payment requests easily