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Displaying gems 1801 - 1830 of 4133 in total

bio-polyploid-tools 0.5.2

Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid w...

3,192 Downloads

bioportal 2.2

Supports linking of Models within a RoR application to a Concept and Ontology within th...

6,264 Downloads

bio-primer3

Primer3-related Ruby code - wrappers, Boulder IO, etc.

107 Downloads

bio-protparam 0.2.0

Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...

2,500 Downloads

biopsy 0.2.0

framework for optimising any computational pipeline or program

1,994 Downloads

bio-publisci 0.1.0

A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...

6,131 Downloads

bio-qtlHD

Ruby tools and scripts for QTL mapping, part of the qtlHD project

370 Downloads

bio-raxml 0.1.0

Just a test

762 Downloads

bio-rdf 0.0.2

Store relationships in a triple-store, such as gene enrichment and QTL, and use this in...

3,380 Downloads

bio-repeatmasker 0.0.3

A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath

994 Downloads

bio-restriction_enzyme 1.0.0

Digests DNA based on restriction enzyme cut patterns

1,891 Downloads

bioroebe 0.0.48

A simple collection of useful Bioruby-related code. It is similar in spirit to...

16,672 Downloads

bioruby-bio 1.3.1.5000

BioRuby is a library for bioinformatics (biology + information science).

1,401 Downloads

bios 0.0.1

Coming soon!

1,714 Downloads

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

6,381 Downloads

bio-samtools 2.2.0

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

27,992 Downloads

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

703 Downloads

bioseqalign 0.0.2

A simple gem to perform fast pairwise sequence alignment using seqan

521 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

1,918 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

7,017 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,290 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

2,678 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

822 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

13,414 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

2,596 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

3,907 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

8,808 Downloads

biotcm 0.1.0

Integrating several databases, data structure and algorithms, BioTCM is designed as a b...

1,580 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

6,718 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

20,927 Downloads