Reverse dependencies for bio Latest version of the following gems require bio
rbbt-sources 3.3.0
Data sources like PubMed, Entrez Gene, or Gene Ontology
224,089 下載
mspire 0.10.8.0
mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...
214,091 下載
snp-search 2.12.0
Use the snp-search tool to create, import, manipulate and query your SNP database
124,811 下載
bio-samtools 2.6.2
Binder of samtools for ruby, on the top of FFI. This project was born from the need...
118,314 下載
bio-polyploid-tools 1.2.1
Repository of tools developed at Crop Genetics in JIC to work with polyploid wheat
112,805 下載
bacterial-annotator 1.0.0
GEM to annotate bacterial genome sequence based on a reference genome and complete the ...
99,256 下載
protk 1.4.4
Commandline tools for proteomics
93,964 下載
parse_fasta 2.5.2
Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...
81,995 下載
bio-gadget 0.5.0
Gadgets for bioinformatics
80,631 下載
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.
75,208 下載
transrate 1.0.1
a library and command-line tool for quality assessment of de-novo transcriptome assemblies
73,496 下載
bio-ucsc-api 0.6.5
Ruby UCSC API: accessing the UCSC Genome Database using Ruby
72,703 下載
bio-svgenes 0.4.1
This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...
58,826 下載
ms-core 0.0.19
basic, shared functionality for mspire libraries.
53,908 下載
biointerchange 1.0.8
BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...
46,361 下載
crb-blast 0.6.9
See summary
44,933 下載
bio-gff3 0.9.1
GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...
44,128 下載
wrnap 1.2.2
A comprehensive wrapper w(RNA)pper for various RNA CLI programs.
43,327 下載
bio-basespace-sdk 0.1.7
BaseSpace Ruby SDK is a Ruby based Software Development Kit to be used in the developme...
41,071 下載
full_lengther_next 1.0.6
FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...
39,355 下載
bio-band 0.1.11
Data mining and machine learning algorithms for JRuby
37,093 下載
fasta_util 0.5.2
Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...
36,298 下載
genevalidatorapp 2.1.8
A Web App wrapper for GeneValidator, a program for validating gene predictions.
36,047 下載
rbfam 12.0.1.1
Light wrapper for RFam data in Ruby.
35,582 下載
genevalidator 2.1.5
The tool validates the input predicted genes and provides useful information (length va...
35,434 下載
bio-publisci 0.1.0
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
31,083 下載
ulla 0.9.9.2
'ulla' is a program for calculating environment-specific substitution tables from user ...
30,048 下載
bio-faster 0.4.5
A fast parser for FastQ files
29,423 下載
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
29,145 下載
bio-ngs 0.5.2
bio-ngs provides a framework for handling NGS data with BioRuby
29,145 下載