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full_lengther_next 0.0.5

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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install:
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Versions:

  1. 1.0.6 - February 22, 2024 (68.5 KB)
  2. 1.0.5 - May 10, 2023 (68.5 KB)
  3. 1.0.4 - September 07, 2022 (68.5 KB)
  4. 1.0.3 - September 07, 2022 (68.5 KB)
  5. 1.0.2 - September 05, 2022 (68.5 KB)
  6. 0.0.5 - March 09, 2012 (36 KB)
Show all versions (19 total)

Runtime Dependencies (5):

scbi_blast >= 0.0.32
scbi_fasta >= 0.1.7
scbi_mapreduce >= 0.0.29
scbi_plot >= 0.0.6
xml-simple >= 1.0.12

Development Dependencies (1):

hoe >= 2.8.0

Owners:

Authors:

  • Noe Fernandez & Dario Guerrero

SHA 256 checksum:

6d4d47162b66c91d949d022079f4ff94802c8448edc4474021f0ce257ff6f4ff

Total downloads 39,130

For this version 3,417

Licenses:

N/A

Required Ruby Version: None

Links: