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full_lengther_next 0.6.2

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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install:
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Versions:

  1. 1.0.6 - February 22, 2024 (68.5 KB)
  2. 1.0.5 - May 10, 2023 (68.5 KB)
  3. 1.0.4 - September 07, 2022 (68.5 KB)
  4. 1.0.3 - September 07, 2022 (68.5 KB)
  5. 1.0.2 - September 05, 2022 (68.5 KB)
  6. 0.6.2 - May 04, 2016 (1.94 MB)
Show all versions (19 total)

Runtime Dependencies (7):

bio >= 1.4.3
scbi_blast >= 0.0.32
scbi_mapreduce >= 0.0.29
scbi_plot >= 0.0.6
scbi_zcat >= 0
xml-simple >= 1.0.12

Development Dependencies (3):

hoe ~> 3.3
newgem >= 1.5.3
rdoc ~> 3.10

Owners:

Authors:

  • Pedro Seoane & Noe Fernandez & Dario Guerrero

SHA 256 checksum:

28f7700e8c2ada7ccd5034290d6dd4f1e69c3751949bdad1b18996deb606dcda

Total downloads 38,971

For this version 2,777

Licenses:

N/A

Required Ruby Version: >= 0

Links: