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Displaying gems 1801 - 1830 of 4342 in total

bio-biostars-analytics 0.2.0

Ruby script for data-mining biostars.org using web-crawling techniques as well as utili...

1,599 Downloads

bio-blastxmlparser 2.0.2

Fast big data BLAST XML parser and library; this libxml2 based version is 50x faster th...

13,624 Downloads

bio-blat-tools 0.1.0

Tools to manipulate blat files from the command line. Uses the Bio::Blat object from Bi...

359 Downloads

bio-bwa 0.2.2

Ruby binding for BWA mapping software, built using Ruby-FFI library

5,292 Downloads

bio-cd-hit-report 0.1.0

A Ruby library for reading CD-HIT cluster reports

4,824 Downloads

bio-chembl 0.1.3

BioRuby plugin for ChEMBL REST API Client, Parser and Container classes

4,015 Downloads

bio-cigar 0.1.0

A parser for CIGAR format alignments.

1,185 Downloads

bio-cnls_screenscraper 0.3.0

Programmatic interface to the cNLS nuclear localisation signal prediction software

3,276 Downloads

bio-commandeer 0.1.0

A dead simple method of running shell commands from within Ruby, by applying opinion

1,361 Downloads

bio-core 0.0.1

Bioruby core plugins

3,446 Downloads

bio-core-ext 0.0.1

BioRuby plugins with dependecies from external library or tools

1,794 Downloads

bio-data-restriction_enzyme 1.109.0

Restriction Enzyme Dataset from REBASE in yaml form

1,771 Downloads

biodb 2.1.0

Short for BioTCM::Databases

4,100 Downloads

bio-dbla-classifier 0.7.1

Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags

9,008 Downloads

bio-dbsnp 0.1.1

decoding the dbSNP bitfield containg detaild information

1,720 Downloads

biodiversity 3.1.5

Tools for biodiversity informatics

45,699 Downloads

biodiversity19 3.1.5

Tools for biodiversity informatics

69,538 Downloads

bio-emboss_six_frame_nucleotide_sequences 0.1.0

a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...

1,805 Downloads

bio-ensembl 1.1.0

This API provides a complete set of methods and classes to access the Ensembl database ...

1,750 Downloads

bio-ensembl-rest 0.2.0

A Ruby library for the RESTful Ensembl API.

1,668 Downloads

bio-exominer 0.0.3

Parse publications for gene names in a fuzzy fashion

603 Downloads

bio-exportpred 0.0.1

Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....

1,686 Downloads

bio-express_beta_diversity 0.1.0

Interface for express beta diversity file formats

1,347 Downloads

bio-faidx 0.0.1

ools to work with fasta files, indexed with samtools. The initial releases depend on bi...

365 Downloads

bio-faster 0.4.5

A fast parser for FastQ files

10,654 Downloads

bio-foo 0.0.0

longer description of your gem

1,736 Downloads

bio-gadget 0.4.8

Gadgets for bioinformatics

22,861 Downloads

bio-gag 0.1.0

bio-gag is a biogem for detecting and correcting a particular type of error that occurs...

2,735 Downloads

bio-gem 1.3.6

Biogem is a software generator for those bioinformaticans who want to start coding an a...

36,472 Downloads

bio-genomic-interval 0.1.2

a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...

6,578 Downloads