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Displaying gems 1831 - 1860 of 4346 in total

bio-genomic-interval 0.1.2

a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...

6,584 Downloads

bio-gff3 0.9.1

GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...

17,981 Downloads

bio-gff3-pltools 0.3.0

Ruby wrapper for the gff3-pltools.

4,074 Downloads

bio-gggenome 0.2.0

A Ruby client for GGGenome the Ultrafast sequence search

1,753 Downloads

bio-gngm 0.2.1

Identify causative mutations in a model genome from NGS reads using the NGM method.

3,992 Downloads

bio-graphics 1.4

Library for visualizing genomic regions

6,698 Downloads

bio-grid 0.3.3

A BioGem to submit jobs on a queue system

14,767 Downloads

bio-hello 0.0.0

Encode any message string into a DNA sequence

2,069 Downloads

bio-hmmer3_report 0.0.1

Enables parsing of HMMER version 3 reports

1,566 Downloads

bio-hmmer_model 0.0.2

Parse PFAM HMM definition files so that the models can be accessible programmatically

2,899 Downloads

bio-hydropathy 0.0.1

Hydropathy scale for BioRuby

1,655 Downloads

bio-img_metadata 0.0.1

Reads metadata from Integrated Microbial Genomes (IMG) metadata files into a programmat...

1,207 Downloads

bio-incanter 0.1.0

A Jruby wrapper to Incanter lib

1,466 Downloads

bioinfo 0.0.5

This gem has been yanked. Please contact me to get the namespace for greater use.

1,258 Downloads

bioinform 0.2.1

A bunch of useful classes for bioinformatics

20,674 Downloads

biointerchange 1.0.8

BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...

9,776 Downloads

bio-ipcress 0.0.1

a programmatic interface to the iPCRess in-silico PCR software. iPCRess is part of the ...

1,451 Downloads

bio-isoelectric_point 0.1.3

A bioruby plugin for calculating the isoelectric point of a protein

7,167 Downloads

bio-kb-illumina 0.1.0

Provide access to the IlluminaHumanAnnotations. Database comes form Bioconductor's pack...

4,006 Downloads

bio-kmer_counter 0.1.2

A biogem for counting small kmers for fingerprinting nucleotide sequences. See README f...

7,248 Downloads

bio-krona 0.1.1

This biogem is built around Krona, a flashy way of representing hierarchical data.

3,083 Downloads

bio-kseq 0.0.2

A fast FASTA/FASTQ parser based on kseq.h by Heng Li

453 Downloads

biola_deploy 0.7.1

Designed to automate deployment of Rails applications using rake tasks

15,487 Downloads

biola_frontend_toolkit 0.4.3

this is a description

6,591 Downloads

biola_logs 0.1.0

Standardized, opinionated log formatting

355 Downloads

biola_wcms_components 0.2.0

Reusable UX components for use in or WCMS projects

318 Downloads

biola_web_services 1.1.3

Simple Ruby wrapper for Biola Web Services REST calls

2,257 Downloads

bio-lazyblastxml 0.4.0

This is very scrappy at the moment, and will need to be seriously cleaned up. It does w...

5,092 Downloads

bio-liftover 1.3.0

Simple, under development Ruby solution for UCSC LiftOver tool

2,190 Downloads

bio-location-rdfize 0.0.0

This is a BioRuby plugin providing FALDO location RDF output method for Bio::Location o...

301 Downloads