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Displaying gems 1891 - 1920 of 4342 in total

bios 0.0.1

Coming soon!

1,879 Downloads

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

7,199 Downloads

bio-samtools 2.3.2

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

34,240 Downloads

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,043 Downloads

bioseqalign 0.0.2

A simple gem to perform fast pairwise sequence alignment using seqan

889 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,072 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

8,023 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

511 Downloads

biostars-api 0.1.4

Gem wrapping biostars.org public API

413 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,613 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

3,342 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

996 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

17,917 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

3,091 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

4,561 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

10,276 Downloads

biotcm 0.2.0

BioTCM is designed as a base gem to build advanced applications on Bioinformatics.

1,908 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

7,537 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

23,719 Downloads

bio-ucsc-util 0.1.2

Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWi...

3,983 Downloads

bio-unichem 0.3.0

BioRuby plugin for UniChem REST Web service

3,207 Downloads

bio-vcf 0.8.2

Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting

3,558 Downloads

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

3,676 Downloads

bio-velvet_underground 0.3.0

Bindings to some internals of the velvet assembler.

1,775 Downloads

bio-wolf_psort_wrapper 0.0.3

Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...

3,231 Downloads

bip70 0.0.1

Create bitcoin payment requests easily

503 Downloads

bipartite_graph 0.0.4

Finds maximum matchings in weighted bipartite graphs

525 Downloads

bipbip 0.5.21

Agent to collect data for common server programs and push them to CopperEgg

23,137 Downloads

bipbop 0.5.1

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for...

1,912 Downloads

bipolar 0.1.0

MongoMapper plugin for first-class documents that can also be embedded

2,156 Downloads