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Displaying gems 1891 - 1920 of 4333 in total

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,030 Downloads

bioseqalign 0.0.2

A simple gem to perform fast pairwise sequence alignment using seqan

875 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,067 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

7,985 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

496 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,603 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

3,319 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

987 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

17,637 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

3,072 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

4,536 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

10,223 Downloads

biotcm 0.2.0

BioTCM is designed as a base gem to build advanced applications on Bioinformatics.

1,898 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

7,505 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

23,615 Downloads

bio-ucsc-util 0.1.2

Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWi...

3,966 Downloads

bio-unichem 0.3.0

BioRuby plugin for UniChem REST Web service

3,191 Downloads

bio-vcf 0.8.2

Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting

3,505 Downloads

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

3,626 Downloads

bio-velvet_underground 0.3.0

Bindings to some internals of the velvet assembler.

1,739 Downloads

bio-wolf_psort_wrapper 0.0.3

Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...

3,218 Downloads

bip70 0.0.1

Create bitcoin payment requests easily

496 Downloads

bipartite_graph 0.0.4

Finds maximum matchings in weighted bipartite graphs

495 Downloads

bipbip 0.5.20

Agent to collect data for common server programs and push them to CopperEgg

22,672 Downloads

bipbop 0.5.1

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for...

1,829 Downloads

bipolar 0.1.0

MongoMapper plugin for first-class documents that can also be embedded

2,151 Downloads

Bira-sweat_shop 1.0.0

TODO

422 Downloads

birb 0.0.3

IRB with added functions to require, load and reload files faster

5,710 Downloads

birch 0.0.8

A basic Ruby tree implementation with an optional C extension for speed.

18,708 Downloads

bird 0.0.1

Description of Bird.

334 Downloads