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Displaying gems 1921 - 1950 of 4399 in total

bioseqalign 0.0.3

A simple gem to perform fast pairwise sequence alignment using seqan

1,034 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,105 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

8,242 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

597 Downloads

biostars-api 0.1.4

Gem wrapping biostars.org public API

660 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,683 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

3,464 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

1,030 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

19,016 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

3,197 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

4,690 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

10,602 Downloads

biotcm 0.2.2

BioTCM is designed as a base gem to build advanced bioinformatics applications.

2,079 Downloads

biotcm-lmma 0.2.0

A combined literature mining and microarray analysis approach to construct gene network...

135 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

7,710 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

24,304 Downloads

bio-ucsc-util 0.1.2

Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWi...

4,085 Downloads

bio-unichem 0.3.0

BioRuby plugin for UniChem REST Web service

3,310 Downloads

bio-vcf 0.8.2

Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting

3,877 Downloads

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

3,976 Downloads

bio-velvet_underground 0.3.0

Bindings to some internals of the velvet assembler.

1,986 Downloads

bio-wolf_psort_wrapper 0.0.3

Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...

3,296 Downloads

bip70 0.0.1

Create bitcoin payment requests easily

540 Downloads

bipartite_graph 0.0.4

Finds maximum matchings in weighted bipartite graphs

753 Downloads

bipbip 0.5.24

Agent to collect data for common server programs and push them to CopperEgg

25,831 Downloads

bipbop 0.5.1

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for...

2,185 Downloads

bipolar 0.1.0

MongoMapper plugin for first-class documents that can also be embedded

2,190 Downloads

Bira-sweat_shop 1.0.0

TODO

468 Downloads

birb 0.0.3

IRB with added functions to require, load and reload files faster

5,826 Downloads

birch 0.0.8

A basic Ruby tree implementation with an optional C extension for speed.

19,377 Downloads