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Displaying gems 1921 - 1950 of 4456 in total

bio-nexml 1.1.0

This plugin reads, writes and generates NeXML

7,625 Downloads

bio-ngs 0.5.2

bio-ngs provides a framework for handling NGS data with BioRuby

6,562 Downloads

bio-octopus 0.1.1

Running and parsing of the protein transmembrane domain predictor octopus

6,181 Downloads

bio-old-biofetch-emulator 0.0.0

Emulator that emulates Bio::Fetch object in BioRuby as if old BioRuby BioFetch server w...

381 Downloads

bio-phyloxml 0.9.0

Provides PhyloXML support for BioRuby.

1,760 Downloads

bio-phyta 0.9.4

Pipeline to remove contaminations from EST libraries

9,303 Downloads

biopieces 0.4.2

Biopieces is a bioinformatic framework of tools easily used and easily created.

12,666 Downloads

bio-pileup_iterator 0.0.4

Iterate through a samtools pileup file

5,093 Downloads

bio-pipengine 0.6.0

A pipeline manager

169 Downloads

bio-plasmoap 0.0.2

The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptid...

4,107 Downloads

bio-polymarker_db_batch 0.5.1

Server for polymarker. To be used with cron

3,455 Downloads

bio-polyploid-tools 0.6.1

Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid w...

7,640 Downloads

bioportal 2.2

Supports linking of Models within a RoR application to a Concept and Ontology within th...

7,421 Downloads

bio-primer3 0.0.1.pre

Primer3-related Ruby code - wrappers, Boulder IO, etc.

163 Downloads

bio-protparam 0.2.0

Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...

2,964 Downloads

biopsy 0.2.0

framework for optimising any computational pipeline or program

3,012 Downloads

bio-publisci 0.1.0

A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...

8,200 Downloads

bio-qtlHD 0.0.1.alpha.1

Ruby tools and scripts for QTL mapping, part of the qtlHD project

414 Downloads

bio-raxml 0.1.0

Just a test

996 Downloads

bio-rdf 0.0.2

Store relationships in a triple-store, such as gene enrichment and QTL, and use this in...

3,887 Downloads

bio-repeatmasker 0.0.3

A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath

1,455 Downloads

bio-restriction_enzyme 1.0.0

Digests DNA based on restriction enzyme cut patterns

2,129 Downloads

bio-rocker 0.1.04

Detecting and quantifying functional genes in short-read metagenomic datasets

2,448 Downloads

bioroebe 0.0.69

A simple collection of useful Bioruby-related code. It is similar in spirit to the ...

28,880 Downloads

bioruby-bio 1.3.1.5000

BioRuby is a library for bioinformatics (biology + information science).

2,883 Downloads

bios 0.0.1

Coming soon!

1,944 Downloads

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

7,525 Downloads

bio-samtools 2.3.2

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

37,262 Downloads

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,191 Downloads

bioseqalign 0.0.3

A simple gem to perform fast pairwise sequence alignment using seqan

1,200 Downloads