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Displaying gems 1921 - 1950 of 4402 in total

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,121 Downloads

bioseqalign 0.0.3

A simple gem to perform fast pairwise sequence alignment using seqan

1,081 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,106 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

8,252 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

601 Downloads

biostars-api 0.1.4

Gem wrapping biostars.org public API

665 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,687 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

3,468 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

1,032 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

19,107 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

3,203 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

4,694 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

10,616 Downloads

biotcm 0.2.2

BioTCM is designed as a base gem to build advanced bioinformatics applications.

2,085 Downloads

biotcm-lmma 0.2.0

A combined literature mining and microarray analysis approach to construct gene network...

139 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

7,718 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

24,331 Downloads

bio-ucsc-util 0.1.2

Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWi...

4,088 Downloads

bio-unichem 0.3.0

BioRuby plugin for UniChem REST Web service

3,314 Downloads

bio-vcf 0.8.2

Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting

3,888 Downloads

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

3,990 Downloads

bio-velvet_underground 0.3.0

Bindings to some internals of the velvet assembler.

1,994 Downloads

bio-wolf_psort_wrapper 0.0.3

Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...

3,298 Downloads

bip70 0.0.1

Create bitcoin payment requests easily

543 Downloads

bipartite_graph 0.0.4

Finds maximum matchings in weighted bipartite graphs

762 Downloads

bipbip 0.5.24

Agent to collect data for common server programs and push them to CopperEgg

25,925 Downloads

bipbop 0.5.1

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for...

2,195 Downloads

bipolar 0.1.0

MongoMapper plugin for first-class documents that can also be embedded

2,192 Downloads

Bira-sweat_shop 1.0.0

TODO

469 Downloads

birb 0.0.3

IRB with added functions to require, load and reload files faster

5,831 Downloads