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Displaying gems 1951 - 1980 of 4513 in total

bio-picard 1.131.5

API of Picard tool

256 Downloads

biopieces 0.4.2

Biopieces is a bioinformatic framework of tools easily used and easily created.

13,477 Downloads

bio-pileup_iterator 0.0.4

Iterate through a samtools pileup file

5,189 Downloads

bio-pipengine 0.6.0

A pipeline manager

210 Downloads

bio-plasmoap 0.0.2

The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptid...

4,177 Downloads

bio-polymarker_db_batch 0.5.1

Server for polymarker. To be used with cron

3,753 Downloads

bio-polyploid-tools 0.7.2

Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid w...

8,470 Downloads

bioportal 2.2

Supports linking of Models within a RoR application to a Concept and Ontology within th...

7,598 Downloads

bio-primer3 0.0.1.pre

Primer3-related Ruby code - wrappers, Boulder IO, etc.

175 Downloads

bio-protparam 0.2.0

Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...

3,027 Downloads

biopsy 0.2.0

framework for optimising any computational pipeline or program

3,146 Downloads

bio-publisci 0.1.0

A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...

8,489 Downloads

bio-qtlHD 0.0.1.alpha.1

Ruby tools and scripts for QTL mapping, part of the qtlHD project

420 Downloads

bio-raxml 0.1.0

Just a test

1,035 Downloads

bio-rdf 0.0.2

Store relationships in a triple-store, such as gene enrichment and QTL, and use this in...

3,959 Downloads

bio-repeatmasker 0.0.3

A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath

1,515 Downloads

bio-restriction_enzyme 1.0.0

Digests DNA based on restriction enzyme cut patterns

2,164 Downloads

bio-rocker 0.2.5

Detecting and quantifying functional genes in short-read metagenomic datasets

3,050 Downloads

bioroebe 0.0.70

A simple collection of useful Bioruby-related code. It is similar in spirit to the ...

29,403 Downloads

bioruby-bio 1.3.1.5000

BioRuby is a library for bioinformatics (biology + information science).

3,070 Downloads

bios 0.0.1

Coming soon!

1,981 Downloads

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

7,700 Downloads

bio-samtools 2.3.2

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

38,660 Downloads

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,262 Downloads

bioseqalign 0.0.3

A simple gem to perform fast pairwise sequence alignment using seqan

1,297 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,174 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

8,635 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

742 Downloads

biostars-api 0.1.4

Gem wrapping biostars.org public API

955 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

1,818 Downloads