RubyGems Navigation menu

Gems

Displaying gems 1951 - 1980 of 4686 in total

bio-cigar 0.1.0

A parser for CIGAR format alignments.

1,635 Downloads

bio-cnls_screenscraper 0.3.0

Programmatic interface to the cNLS nuclear localisation signal prediction software

3,704 Downloads

bio-commandeer 0.1.0

A dead simple method of running shell commands from within Ruby, by applying opinion

1,796 Downloads

bio-core 0.0.1

Bioruby core plugins

3,867 Downloads

bio-core-ext 0.0.1

BioRuby plugins with dependecies from external library or tools

1,995 Downloads

bio-data-restriction_enzyme 1.109.0

Restriction Enzyme Dataset from REBASE in yaml form

1,990 Downloads

biodb 2.1.0

Short for BioTCM::Databases

4,934 Downloads

bio-dbla-classifier 0.7.1

Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags

10,244 Downloads

bio-dbsnp 0.1.1

decoding the dbSNP bitfield containg detaild information

1,942 Downloads

biodiversity 3.4.1

Tools for biodiversity informatics

55,091 Downloads

biodiversity19 3.1.7

Tools for biodiversity informatics

80,139 Downloads

bio-emboss_six_frame_nucleotide_sequences 0.1.0

a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...

2,039 Downloads

bio-ensembl 1.1.0

This API provides a complete set of methods and classes to access the Ensembl database ...

1,967 Downloads

bio-ensembl-rest 0.2.0

A Ruby library for the RESTful Ensembl API.

2,092 Downloads

bio-exominer 0.0.3

Parse publications for gene names in a fuzzy fashion

822 Downloads

bio-exportpred 0.0.1

Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....

1,909 Downloads

bio-express_beta_diversity 0.1.0

Interface for express beta diversity file formats

1,780 Downloads

bio-faidx 0.0.1

ools to work with fasta files, indexed with samtools. The initial releases depend on bi...

602 Downloads

bio-fasta_retrieve 0.0.7

Gem that helps to retrieve DNA sequence from UCSC

991 Downloads

bio-faster 0.4.5

A fast parser for FastQ files

12,166 Downloads

bio-foo 0.0.0

longer description of your gem

1,951 Downloads

bio-freebayes 0.1.6

The API for Freebayes version #{Bio::Freebayes::EXTVERSION}

567 Downloads

bio-gadget 0.4.8

Gadgets for bioinformatics

27,653 Downloads

bio-gag 0.1.0

bio-gag is a biogem for detecting and correcting a particular type of error that occurs...

3,166 Downloads

bio-gem 1.3.6

Biogem is a software generator for those bioinformaticans who want to start coding an a...

41,134 Downloads

bio-genomic-interval 0.1.2

a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...

7,232 Downloads

bio-gfastqc 0.0.4

Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...

570 Downloads

bio-gff3 0.9.1

GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...

20,044 Downloads

bio-gff3-pltools 0.3.0

Ruby wrapper for the gff3-pltools.

4,693 Downloads

bio-gggenome 0.2.0

A Ruby client for GGGenome the Ultrafast sequence search

2,168 Downloads