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Displaying gems 2041 - 2070 of 4693 in total

bios 0.0.1

Coming soon!

2,111 Downloads

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

8,291 Downloads

bio-samtools 2.3.3

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

42,167 Downloads

bio-samtools-server 0.1.2

A minimal web service on the top of sinatra to query bam files

1,521 Downloads

bioseqalign 0.0.3

A simple gem to perform fast pairwise sequence alignment using seqan

1,703 Downloads

bio-sge 0.0.0

Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...

2,303 Downloads

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

9,323 Downloads

bio-sra 0.2.0

A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...

1,004 Downloads

biostars-api 0.1.4

Gem wrapping biostars.org public API

1,505 Downloads

bio-statsample-glm 0.1.1

Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...

2,075 Downloads

bio-statsample-timeseries 0.2.1

Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...

4,174 Downloads

bio-stockholm 0.0.1

Parses stockholm sequence alignment format

1,243 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

22,973 Downloads

bio-synreport 0.1.2

Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...

3,763 Downloads

bio-tabix 1.0.1

Tabix file indexing routines from the samtools package http://samtools.sourceforge.net/

5,403 Downloads

bio-table 1.0.0

Functions and tools for tranforming and changing tab delimited and comma separated tabl...

12,254 Downloads

biotcm 0.3.0

BioTCM is designed as a base gem to build advanced bioinformatics applications.

2,943 Downloads

biotcm-lmma 0.2.0

A combined literature mining and microarray analysis approach to construct gene network...

372 Downloads

bio-tm_hmm 0.2.2

A bioruby plugin for interaction with the transmembrane predictor TMHMM

8,627 Downloads

bio-ucsc-api 0.6.2

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

27,367 Downloads

bio-ucsc-util 0.1.2

Ruby FFI binding of the ucsc kent src. Implemented utilities include: bigWigInfo, bigWi...

4,630 Downloads

bio-unichem 0.3.0

BioRuby plugin for UniChem REST Web service

3,842 Downloads

bio-vcf 0.9.0

Smart lazy multi-threaded parser for VCF format with useful filtering and output rewriting

5,663 Downloads

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

5,445 Downloads

bio-velvet_underground 0.3.0

Bindings to some internals of the velvet assembler.

2,981 Downloads

bio-wolf_psort_wrapper 0.0.3

Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...

3,687 Downloads

bip70 0.0.1

Create bitcoin payment requests easily

750 Downloads

bipartite_graph 0.0.4

Finds maximum matchings in weighted bipartite graphs

1,687 Downloads

bipbip 0.6.6

Agent to collect data for common server programs and push them to CopperEgg

38,435 Downloads

bipbop 0.5.1

bipbop is the best service for consulting brazilian data. See http://bipbop.com.br/ for...

3,367 Downloads