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Displaying gems 2131 - 2160 of 4998 in total

biomart 0.2.3

A ruby API for interacting with Biomart XML based webservices.

26,203 Downloads

biome 0.0.1

WIP

910 Downloads

biomodel_client 0.1.0

Client package for creating, sending, recieving and consuming SOAP messages from BioMod...

2,265 Downloads

bio-mummer 0.2.1

Help for working with the output of the .delta files produced by nucmer and promer

1,628 Downloads

bio-nexml 1.1.0

This plugin reads, writes and generates NeXML

8,889 Downloads

bio-ngs 0.5.2

bio-ngs provides a framework for handling NGS data with BioRuby

8,852 Downloads

bio-octopus 0.1.1

Running and parsing of the protein transmembrane domain predictor octopus

7,198 Downloads

bio-old-biofetch-emulator 0.0.0

Emulator that emulates Bio::Fetch object in BioRuby as if old BioRuby BioFetch server w...

793 Downloads

bio-phyloxml 0.9.0

Provides PhyloXML support for BioRuby.

2,170 Downloads

bio-phyta 0.9.4

Pipeline to remove contaminations from EST libraries

10,910 Downloads

bio-picard 1.131.5

API of Picard tool

713 Downloads

bio-pileup_iterator 0.0.4

Iterate through a samtools pileup file

6,084 Downloads

bio-pipengine 0.8.1

A pipeline manager

896 Downloads

bio-plasmoap 0.0.2

The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptid...

4,824 Downloads

bio-plates 0.2.0

Methods for handling multiwell plate annotations, includes ranges and quadrants

154 Downloads

bio-polymarker_db_batch 0.5.1

Server for polymarker. To be used with cron

6,310 Downloads

bio-polyploid-tools 0.7.3

Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid w...

14,829 Downloads

bioportal 2.2

Supports linking of Models within a RoR application to a Concept and Ontology within th...

8,739 Downloads

bio-primer3 0.0.1.pre

Primer3-related Ruby code - wrappers, Boulder IO, etc.

371 Downloads

bio-protparam 0.2.0

Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...

3,657 Downloads

biopsy 0.3.0

framework for optimising any computational pipeline or program

5,953 Downloads

bio-publisci 0.1.0

A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...

11,003 Downloads

bio-qtlHD 0.0.1.alpha.1

Ruby tools and scripts for QTL mapping, part of the qtlHD project

620 Downloads

bio-raxml 0.1.0

Just a test

1,407 Downloads

bio-rdf 0.0.2

Store relationships in a triple-store, such as gene enrichment and QTL, and use this in...

4,776 Downloads

bio-repeatmasker 0.0.3

A simple gem to parse, filter/search raw Repeat Masker output file from GoldenPath

2,151 Downloads

bio-restriction_enzyme 1.0.0

Digests DNA based on restriction enzyme cut patterns

2,521 Downloads

bio-rocker 1.1.10

Detecting and quantifying functional genes in short-read metagenomic datasets

6,554 Downloads

bioroebe 0.0.181

This project is called BioRoebe. The name insinuates that it has to do with "bio"-...

57,059 Downloads

bioruby-bio 1.3.1.5000

BioRuby is a library for bioinformatics (biology + information science).

4,808 Downloads