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Displaying gems 2131 - 2160 of 5186 in total

bio-blastxmlparser 2.0.4

Fast big data BLAST XML parser and library; this libxml2 based version is 50x faster th...

21,002 Downloads

bio-blat-tools 0.1.0

Tools to manipulate blat files from the command line. Uses the Bio::Blat object from Bi...

1,009 Downloads

bio-bwa 0.2.2

Ruby binding for BWA mapping software, built using Ruby-FFI library

6,938 Downloads

bio-cd-hit-report 0.1.0

A Ruby library for reading CD-HIT cluster reports

6,896 Downloads

bio-chembl 0.1.3

BioRuby plugin for ChEMBL REST API Client, Parser and Container classes

5,620 Downloads

bio-cigar 0.1.0

A parser for CIGAR format alignments.

2,285 Downloads

bio-cnls_screenscraper 0.3.0

Programmatic interface to the cNLS nuclear localisation signal prediction software

4,386 Downloads

bio-commandeer 0.1.3

A dead simple method of running shell commands from within Ruby, by applying opinion

3,594 Downloads

bio-conduit 1.0.0

A pipeline creator for bioruby

597 Downloads

bio-core 0.0.1

Bioruby core plugins

4,564 Downloads

bio-core-ext 0.0.1

BioRuby plugins with dependecies from external library or tools

2,410 Downloads

bio-data-restriction_enzyme 1.109.0

Restriction Enzyme Dataset from REBASE in yaml form

2,378 Downloads

bio-dbla-classifier 0.7.1

Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags

12,093 Downloads

bio-dbsnp 0.1.1

decoding the dbSNP bitfield containg detaild information

2,338 Downloads

biodiversity 3.4.1

Tools for biodiversity informatics

67,957 Downloads

biodiversity19 3.1.7

Tools for biodiversity informatics

94,627 Downloads

BioDSL 1.0.2

BioDSL is a Bioinformatics Domain Specific Language.

1,363 Downloads

bio-emboss_six_frame_nucleotide_sequences 0.1.0

a method to get the nucleotide sequence of translations done by the EMBOSS bioinformati...

2,468 Downloads

bio-ensembl 1.1.0

This API provides a complete set of methods and classes to access the Ensembl database ...

2,385 Downloads

bio-ensembl-rest 0.2.0

A Ruby library for the RESTful Ensembl API.

2,812 Downloads

bio-exominer 0.0.3

Parse publications for gene names in a fuzzy fashion

1,222 Downloads

bio-exportpred 0.0.1

Wrapper around the ExportPred algorithm for predicting P. falciparum exported proteins....

2,316 Downloads

bio-express_beta_diversity 0.1.0

Interface for express beta diversity file formats

2,490 Downloads

bio-faidx 0.0.1

ools to work with fasta files, indexed with samtools. The initial releases depend on bi...

1,032 Downloads

bio-fasta_retrieve 0.0.7

Gem that helps to retrieve DNA sequence from UCSC

5,312 Downloads

bio-faster 0.4.5

A fast parser for FastQ files

14,380 Downloads

bio-fastqc 0.6.0

ruby parser for FastQC, a quality control software for high-throughput sequencing data.

3,101 Downloads

bio-foo 0.0.0

longer description of your gem

2,360 Downloads

bio-freebayes 0.1.6

The API for Freebayes version #{Bio::Freebayes::EXTVERSION}

1,292 Downloads

bio-gadget 0.4.8

Gadgets for bioinformatics

33,783 Downloads