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anncrsnp 0.1.7

AnNCR-SNP integrates data from various sources, allowing the user to investigate the potential effects of variants in non-coding regions of the human genome. AnNCR-SNP consists of a database containing data on all non-coding elements and two main programs: manager and finder. The manager program is responsible for creating the local data-base, and the finder program receives the user queries in order to search in the local database and retrieve information. The user can find information about various regu-latory elements, such as TFBs, open chromatin, histone modification and methyla-tion sites, information about SNPs from dbSNP and gene information from RefSeq.

Gemfile:
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install:
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Versions:

  1. 0.1.7 - September 28, 2016 (27 KB)
  2. 0.1.6 - July 25, 2016 (20 KB)
  3. 0.1.5 - July 22, 2016 (20 KB)
  4. 0.1.4 - July 20, 2016 (20 KB)
  5. 0.1.3 - July 20, 2016 (19 KB)
Show all versions (8 total)

Runtime Dependencies (2):

rubyzip >= 0
sqlite3 >= 0

Development Dependencies (3):

bundler ~> 1.10
rake ~> 10.0
rspec >= 0

Owners:

Authors:

  • Elena Rojano, Pedro Seoane

SHA 256 checksum:

8c63c62afcbe850f6903de9d56d5fde4a71f3d267e7e87cf9512d1dca867ac4f

Total downloads 20,099

For this version 2,872

License:

MIT

Required Ruby Version: >= 0

Links: