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full_lengther_next 1.0.6

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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install:
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Versions:

  1. 1.0.6 - February 22, 2024 (68.5 KB)
  2. 1.0.5 - May 10, 2023 (68.5 KB)
  3. 1.0.4 - September 07, 2022 (68.5 KB)
  4. 1.0.3 - September 07, 2022 (68.5 KB)
  5. 1.0.2 - September 05, 2022 (68.5 KB)
Show all versions (19 total)

Runtime Dependencies (7):

bio ~> 2.0.4
scbi_blast >= 0
scbi_fasta >= 0
scbi_zcat >= 0
xml-simple >= 0

Development Dependencies (3):

bundler ~> 1.12
rake ~> 10.0
rspec ~> 3.0

Owners:

Pushed by:

Authors:

  • Pedro Seoane, Noe Fernandez, Dario Guerrero

SHA 256 checksum:

d2b7d6486ca6c8ef8c617cb17c1430b224252c3d8dd3aa4e73cd1b82549de3e6

Total downloads 38,971

For this version 147

License:

MIT

Required Ruby Version: >= 0

Links: