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ngs-ci 0.0.1.a

Calculated a metric that estimates read complexity at each base for RNA-seq BAM files. Alternative to pileup format.

Gemfile:
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install:
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Versions:

  1. 0.0.2.b - December 21, 2015 (86.5 KB)
  2. 0.0.1.a - October 28, 2015 (81 KB)
Show all versions (3 total)

Runtime Dependencies (5):

bio-samtools = 2.3.2
parallel ~> 1.4
ruby-prof ~> 0.15
trollop ~> 2.1.2
yell >= 0

Development Dependencies (4):

bundler >= 0
coveralls >= 0
rake ~> 10.0
rspec ~> 3.1

Owners:

Authors:

  • Matthew Ralston

SHA 256 checksum:

21051667c869eb48cacbcb174767bd79b0c35c4c9b641cb8b9e58b88cd6bbffa

Total downloads 3,888

For this version 1,911

License:

GPL v3

Required Ruby Version: >= 0

Required Rubygems Version: > 1.3.1

Links: