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viral_seq 1.6.4

A Ruby Gem with bioinformatics tools for processing viral NGS data. Specifically for Primer-ID sequencing and HIV drug resistance analysis.

Versions:

  1. 1.6.4 - July 19, 2022 (7.05 MB)
  2. 1.6.3 - February 06, 2022 (3.53 MB)
  3. 1.6.1 - February 02, 2022 (3.53 MB)
  4. 1.6.0 - January 18, 2022 (3.53 MB)
  5. 1.5.0 - January 06, 2022 (3.47 MB)
Show all versions (43 total)

Runtime Dependencies (5):

  • colorize ~> 0.1
  • combine_pdf ~> 1.0, >= 1.0.0
  • muscle_bio ~> 0.5
  • prawn ~> 2.3, >= 2.3.0
  • prawn-table ~> 0.2, >= 0.2.0
  • Development Dependencies (3):

  • bundler ~> 2.0
  • rake ~> 13.0
  • rspec ~> 3.0
  • Requirements:

    R required for some functions

    Owners:

    Pushed by:

    Authors:

    • Shuntai Zhou, Michael Clark

    SHA 256 checksum:

    158aa295b0f0c002a48ff8e3a0934544263e091831b2cf5b295f797f66e0deb6

    Total downloads 40,526

    For this version 184

    Gemfile:
    = Copy to clipboard Copied!

    install:
    =

    License:

    MIT

    Required Ruby Version: >= 2.5

    Required Rubygems Version: >= 1.3.6

    Links: