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Reverse dependencies for bio 1.5.1

mspire 0.10.8.0

mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms...

114,660 Downloads

rbbt-sources 3.1.20

Data sources like PubMed, Entrez Gene, or Gene Ontology

66,004 Downloads

snp-search 2.12.0

Use the snp-search tool to create, import, manipulate and query your SNP database

64,158 Downloads

bio-samtools 2.5.1

Binder of samtools for ruby, on the top of FFI. This project was born from the need...

60,901 Downloads

bio-gadget 0.5.0

Gadgets for bioinformatics

41,366 Downloads

protk 1.4.4

Commandline tools for proteomics

39,665 Downloads

bio-ucsc-api 0.6.4

Ruby UCSC API: accessing the UCSC Genome Database using Ruby

38,212 Downloads

bio-svgenes 0.4.1

This bio-gem facilitates the creation of pretty, publication quality SVG images from fe...

32,812 Downloads

ms-core 0.0.19

basic, shared functionality for mspire libraries.

30,732 Downloads

transrate 1.0.1

a library and command-line tool for quality assessment of de-novo transcriptome assemblies

28,471 Downloads

bio-gff3 0.9.1

GFF3 (genome browser) information and digest mRNA and CDS sequences. Options for low me...

26,351 Downloads

bio-polyploid-tools 0.7.3

Repository of tools developed in TGAC and Crop Genetics in JIC to work with polyploid w...

24,998 Downloads

parse_fasta 2.2.0

Provides nice, programmatic access to fasta and fastq files, as well as providing Seque...

24,894 Downloads

biointerchange 1.0.8

BioInterchange is a Ruby gem, command-line tool, web-service for turning heterogeneous ...

21,988 Downloads

fasta_util 0.5.2

Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on th...

20,873 Downloads

iroki 0.0.36

Command line app and library code for Iroki, a phylogenetic tree customization program.

18,312 Downloads

wrnap 1.2.2

A comprehensive wrapper w(RNA)pper for various RNA CLI programs.

17,983 Downloads

bio-band 0.1.11

Data mining and machine learning algorithms for JRuby

17,897 Downloads

crb-blast 0.6.9

See summary

17,337 Downloads

ulla 0.9.9.2

'ulla' is a program for calculating environment-specific substitution tables from user ...

17,039 Downloads

bio-faster 0.4.5

A fast parser for FastQ files

16,898 Downloads

rbfam 12.0.1.1

Light wrapper for RFam data in Ruby.

15,770 Downloads

egor 0.9.0

'egor' is a program for calculating environment-specific substitution tables from user ...

15,675 Downloads

bacterial-annotator 0.6.6

GEM to annotate bacterial genome sequence based on a reference genome and complete the ...

15,340 Downloads

acnfp-trans-counter 0.2.0

A quick and dirty tool for analysis of transition and transversion frequency aross and ...

15,302 Downloads

bio-publisci 0.1.0

A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...

15,246 Downloads

full_lengther_next 0.6.2

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and i...

15,137 Downloads

bio-dbla-classifier 0.7.1

Methods to classify and manipulate PfEMP1 DBL-alpha sequence tags

14,174 Downloads

bio-bigbio 0.1.6

Fasta reader, ORF emitter, sequence translation

13,732 Downloads

Total downloads 156,817

For this version 20,810

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Required Ruby Version: >= 0

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