Reverse dependencies for bio Latest version of the following gems require bio
bio-kb-illumina 0.1.0
Provide access to the IlluminaHumanAnnotations. Database comes form Bioconductor's pack...
10.057 Downloads
mspire-sequest 0.2.7
reads .SRF, .SQT and supports conversions
10.019 Downloads
bio-core 0.0.1
Bioruby core plugins
9.530 Downloads
bio-core 0.0.1
Bioruby core plugins
9.530 Downloads
bio-wolf_psort_wrapper 0.0.3
Enables the localisation predictor WoLF PSORT to be run locally. The algorithm is avail...
9.329 Downloads
bio-cnls_screenscraper 0.3.0
Programmatic interface to the cNLS nuclear localisation signal prediction software
9.283 Downloads
bio-mummer 0.2.1
Help for working with the output of the .delta files produced by nucmer and promer
8.981 Downloads
bio-hmmer_model 0.0.2
Parse PFAM HMM definition files so that the models can be accessible programmatically
8.848 Downloads
bio-gag 0.1.0
bio-gag is a biogem for detecting and correcting a particular type of error that occurs...
8.804 Downloads
qu-utils 1.0.3
Useful class or methods used in qu-* projects.
8.222 Downloads
ensemblrest 1.1.1
Ensembl REST Ruby API
8.068 Downloads
bio-hmmer3_report 0.1.0
Enables programmatic parsing of HMMER version 3 reports
8.016 Downloads
ezgff 0.0.6
Utilities for GFF3, the genome annotation format. Useful to explore the gene model feat...
7.936 Downloads
sylfy 0.1.0
Systems Biology Library for Ruby
7.915 Downloads
bio-gggenome 0.2.0
A Ruby client for GGGenome the Ultrafast sequence search
7.789 Downloads
bio-ensembl-rest 0.2.0
A Ruby library for the RESTful Ensembl API.
7.743 Downloads
bio-old-biofetch-emulator 1.0.0
Emulator that emulates Bio::Fetch object in BioRuby as if old BioRuby BioFetch server w...
7.669 Downloads
bio-statsample-glm 0.1.1
Statsample-GLM is an extension to Statsample, an advance statistics suite in Ruby. This...
7.661 Downloads
mizlab 0.1.7
The tools for our laboratory
7.584 Downloads
bio-ipcress 0.1.0
a programmatic interface to the iPCRess in-silico PCR software. iPCRess is part of the ...
7.417 Downloads
bio-express_beta_diversity 0.1.0
Interface for express beta diversity file formats
7.411 Downloads
bio-cigar 0.1.0
A parser for CIGAR format alignments.
7.245 Downloads
bio-shell 1.0.1
BioRuby Shell is a command line interface on BioRuby open source bioinformatics library...
7.217 Downloads
bio-samtools-server 0.1.2
A minimal web service on the top of sinatra to query bam files
7.119 Downloads
neurohmmer 0.1.2
Identify Neuropeptides using powerful Hidden Markov Models. For further information p...
7.075 Downloads
bio-nwk 0.1.4
Some codes for parsing newick tree
6.687 Downloads
ruby-band 0.1.13
Data mining and machine learning algorithms for JRuby
6.652 Downloads
bio-gfastqc 0.0.4
Bioinformatics. Aggregate FastQC (quality control for Next Generation Sequencing -NGS-)...
6.282 Downloads
bio-pangenome 0.1.3
Tools to find similarity between pangenomes.
5.775 Downloads
bio-sge 0.0.0
Entries in a flatfile will be parased by the BioRuby's Bio::FlatFile.auto module. These...
5.656 Downloads