bio 的反向依赖 以下 Gem 的最新版本需要 bio
cheripic 1.2.7
a library and commandline tool to pick causative mutation from bulks segregant sequencing
15,673 下载
bio-graphics 1.4
Library for visualizing genomic regions
15,374 下载
bio-plasmoap 0.1.1
The PlasmoAP algorithm (Foth and Ralph et. al. 2003) predicts apicoplast transit peptid...
15,178 下载
dirseq 0.4.3
FPKG (gene expression metric) calculator for metatranscriptomics
15,166 下载
neurohmmerapp 0.0.7
A Web App wrapper for NeuroHmmer, a program for validating gene predictions.
15,020 下载
publisci 0.1.6
A toolkit for publishing scientific results and datasets using RDF, OWL, and related te...
14,594 下载
bio-octopus 0.1.1
Running and parsing of the protein transmembrane domain predictor octopus
14,511 下载
bio-octopus 0.1.1
Running and parsing of the protein transmembrane domain predictor octopus
14,511 下载
bio-statsample-timeseries 0.2.1
Statsample-timeseries is an extension to Statsample. It incorporates helpful timeseries...
14,319 下载
bio-krona 0.2.0
This biogem is built around Krona, a flashy way of representing hierarchical data.
14,083 下载
bio-bwa 0.2.2
Ruby binding for BWA mapping software, built using Ruby-FFI library
13,956 下载
scaffolder-tools 0.1.3
Binary to use with scaffolder genome scaffolds
13,941 下载
bio-lazyblastxml 0.4.0
This is very scrappy at the moment, and will need to be seriously cleaned up. It does w...
13,551 下载
bio-pileup_iterator 0.0.4
Iterate through a samtools pileup file
13,474 下载
bio-pileup_iterator 0.0.4
Iterate through a samtools pileup file
13,474 下载
exodb 0.1.3
A library for exome sequencing data management
13,359 下载
bio-liftover 1.3.0
Simple, under development Ruby solution for UCSC LiftOver tool
13,142 下载
bio-gngm 0.2.1
Identify causative mutations in a model genome from NGS reads using the NGM method.
12,980 下载
bio-gngm 0.2.1
Identify causative mutations in a model genome from NGS reads using the NGM method.
12,980 下载
goruby 0.2.0
GoRuby makes it easy to interact with the Gene Ontology by using the infrastructure set...
12,540 下载
bio-chembl 0.1.3
BioRuby plugin for ChEMBL REST API Client, Parser and Container classes
12,469 下载
bio-rdf 0.0.2
Store relationships in a triple-store, such as gene enrichment and QTL, and use this in...
11,986 下载
ruby-ensembl-api 1.0.1
ruby-ensembl-api provides a ruby API to the Ensembl databases (http://www.ensembl.org)
11,963 下载
bio-unichem 0.3.0
BioRuby plugin for UniChem REST Web service
11,660 下载
bio-synreport 0.1.2
Takes a GFF and genomic sequence file, constructs CDS and when given a position and alt...
11,586 下载
bio-sra 0.3.1
A Sequence Read Archive (SRA) download script and Ruby interface to the SRAdb (SRA meta...
11,344 下载
bio-protparam 0.2.0
Bio::Protparam has same interface and function as Bio::Tools::Protparam class of BioPer...
10,221 下载
SilkSlider 0.2.2
Predict silk-like proteins from its amino acid sequence.
10,204 下载
semin-egor 0.9.3
A new ESST generator
10,093 下载
bio-biostars-analytics 0.2.0
Ruby script for data-mining biostars.org using web-crawling techniques as well as utili...
10,087 下载