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viral_seq 1.2.0

A Ruby Gem with bioinformatics tools for processing viral NGS data. Specifically for Primer-ID sequencing and HIV drug resistance analysis.

Gemfile:
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install:
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Versions:

  1. 1.7.1 - May 12, 2023 (3.54 MB)
  2. 1.7.0 - August 25, 2022 (3.53 MB)
  3. 1.6.4 - July 19, 2022 (7.05 MB)
  4. 1.6.3 - February 06, 2022 (3.53 MB)
  5. 1.6.1 - February 02, 2022 (3.53 MB)
  6. 1.2.0 - May 11, 2021 (3.47 MB)
Show all versions (46 total)

Runtime Dependencies (5):

colorize ~> 0.1
combine_pdf ~> 1.0, >= 1.0.0
muscle_bio ~> 0.4
prawn ~> 2.3, >= 2.3.0
prawn-table ~> 0.2, >= 0.2.0

Development Dependencies (3):

bundler ~> 2.0
rake ~> 13.0
rspec ~> 3.0
Show all transitive dependencies

Requirements:

R required for some functions

Owners:

Pushed by:

Authors:

  • Shuntai Zhou, Michael Clark

SHA 256 checksum:

1221b1ead8f0676aa9e97d874e5a001e41e63faf1ba0d04bb61e3c147f077a87
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Total downloads 55,625

For this version 1,560

License:

MIT

Required Ruby Version: >= 2.5

Required Rubygems Version: >= 1.3.6

Links:

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