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bioの被依存性 Latest version of the following gems require bio

bio-bigbio 0.1.6

Fasta reader, ORF emitter, sequence translation

17,424 ダウンロード

acnfp-trans-counter 0.2.0

A quick and dirty tool for analysis of transition and transversion frequency aross and ...

17,104 ダウンロード

acnfp-trans-counter 0.2.0

A quick and dirty tool for analysis of transition and transversion frequency aross and ...

17,104 ダウンロード

bio-signalp 0.3.1

A wrapper for the signal peptide prediction algorith SignalP. Not very well supported, ...

16,843 ダウンロード

bio-tm_hmm 0.2.4

A bioruby plugin for interaction with the transmembrane predictor TMHMM

16,628 ダウンロード

bio-phyta 0.9.4

Pipeline to remove contaminations from EST libraries

16,345 ダウンロード

bio-kmer_counter 0.1.2

A biogem for counting small kmers for fingerprinting nucleotide sequences. See README f...

15,977 ダウンロード

bio-polymarker_db_batch 0.5.1

Server for polymarker. To be used with cron

15,632 ダウンロード

scaffolder 0.5.0

Turns scaffolded contigs and annotations into a genome.

15,469 ダウンロード

bio-velvet 0.6.0

Parser to work with some file formats used in the velvet DNA assembler

15,309 ダウンロード

scaffolder-test-helpers 0.4.1

Useful Helper methods and classes for testing scaffolder.

14,940 ダウンロード

genevalidatorapp 2.1.8

A Web App wrapper for GeneValidator, a program for validating gene predictions.

14,826 ダウンロード

bio-sambamba 0.0.5

New Sambamba library comes with a command-line tool for working with SAM/BAM files. Thi...

14,526 ダウンロード

bio-assembly 0.1.0

bioruby plugin to parse, write, and manipulate assembly data

13,881 ダウンロード

bio-assembly 0.1.0

bioruby plugin to parse, write, and manipulate assembly data

13,881 ダウンロード

bio-isoelectric_point 0.1.3

A bioruby plugin for calculating the isoelectric point of a protein

13,486 ダウンロード

bio-nexml 1.1.0

This plugin reads, writes and generates NeXML

13,256 ダウンロード

sciruby-full 0.2.11

Scientific gems for Ruby. This is the full installation with rigid version constraints.

12,634 ダウンロード

scaffolder-annotation-locator 0.2.0

Build a genome scaffold using scaffolder and a set of annotated contigs. This tool upda...

12,281 ダウンロード

genfrag 0.0.0.4

This is a development release. Some features are functional at this time. Genfrag allo...

11,986 ダウンロード

bio-fasta_retrieve 0.0.7

Gem that helps to retrieve DNA sequence from UCSC

11,866 ダウンロード

bio-genomic-interval 0.1.2

a BioRuby plugin: handling genomic intervals,such as "chr1:123-456", and overlap state ...

11,700 ダウンロード

bio-graphics 1.4

Library for visualizing genomic regions

11,488 ダウンロード

bio-cd-hit-report 0.1.0

A Ruby library for reading CD-HIT cluster reports

10,991 ダウンロード

bio-velvet_underground 0.3.1

Bindings to some internals of the velvet assembler.

10,726 ダウンロード

bio-octopus 0.1.1

Running and parsing of the protein transmembrane domain predictor octopus

10,642 ダウンロード

bio-octopus 0.1.1

Running and parsing of the protein transmembrane domain predictor octopus

10,642 ダウンロード

finishm 0.0.9

De-novo assemblies generally only provide draft genomes. FinishM is aimed at improving ...

10,270 ダウンロード

semin-ulla 0.9.9.1

'ulla' is a program for calculating environment-specific substitution tables from user ...

10,173 ダウンロード

bio-bwa 0.2.2

Ruby binding for BWA mapping software, built using Ruby-FFI library

10,064 ダウンロード

累計ダウンロード数 304,077

現行バージョン 7,719

Gemfile:
= クリップボードにコピー コピー完了!

インストール:
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ライセンス:

Ruby

必要Rubyバージョン: >= 0

リンク集: